Huang et al. (2008) A recoding method to improve the humoral immune response to an HIV DNA vaccine. <i>PLoS ONE</i> 3(9): e3214.
Macpherson et al. (2008) Nonadaptive explanations for signatures of partial selective sweeps in Drosophila. <i>Molecular Biology and Evolution</i> 25(6): 1025-1042.
Tay-Sontheimer et al. (2014) Detection of an endogenous urinary biomarker associated with CYP2D6 activity using global metabolomics. <i>Pharmacogenomics</i> 15(16): 1947-1962.
Grechkin et al. (2014) Pathway Graphical Lasso. <i>Twenty-Ninth AAAI Conference on Artificial Intelligence (AAAI-15).</i>
Mohan et al. (2012) Structured sparse learning of Gaussian graphical models. <i>Advances in Neural Information Processing Systems.</i>
Bis J et al. (2018) Whole exome sequencing study identifies novel rare and common Alzheimer’s-associated variants involved in ... <i>Molecular Psychiatry.</i>
Sung et al. (2012) Molecular signatures from omics data: from chaos to consensus. <i>Biotechnology Journal</i> 7(8): 946-957.
Micheel et al; Institute of Medicine (2012) Evolution of Translational Omics: Lessons Learned and the Path Forward. <i>National Academy of Sciences Press</i>. 300 pages.
Bien and Witten (2016) Penalized Estimation in Complex Models. Handbook of Big Data. CRC Press. Editors: Peter Buhlmann, Michael Kane, Petros Drineas, and Mark van der Laan.
Maldonado et al. (2012) The Stanford Integrated Psychosocial Assessment for Transplantation (SIPAT): A New Tool for the ... <i>Psychosomatics</i> 53(2): 123-132.
Witten, Fertig, Anandkumar, and Dean (2018) What’s in a name? The need to nip NIPS. <i>NeurIPS Workshop on Critiquing and Correcting Trends in Machine Learning.</i>
Jewell and Witten (2018) Exact spike train inference via l0 optimization. <i>Annals of Applied Statistics</i> 12(4): 2457-2482.
Petersen, Simon, and Witten (2018) SCALPEL: Extracting neurons from calcium imaging data. <i>Annals of Applied Statistics</i> 12(4): 2430-2456.
Chen, Shojaie, and Witten (2017) Network reconstruction from high-dimensional ordinary ... <i>Journal of the American Statistical Association</i> 112(520): 1697-1707.
Chen, Witten, and Shojaie (2017) Nearly assumptionless screening for the mutually-exciting multivariate Hawkes process. <i>Electronic Journal of Statistics</i> 11(1): 1207-1234.